Program Listing for File HuffmanFMIndex.h
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/*--------------------------------------------------------------------------*/
/*-------------------------- File HuffmanFMIndex.h -------------------------*/
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/*----------------------------- DEFINITIONS --------------------------------*/
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#ifndef __ADS_HuffmanFMIndex
#define __ADS_HuffmanFMIndex
/* self-identification: #endif constant */
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/*------------------------------ INCLUDES ----------------------------------*/
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#include "ADS/Contract.h"
#include "ADS/compression/BurrowsWheeler.h"
#include "ADS/succinct/BitVector.h"
#include "ADS/succinct/HuffmanWaveletTree.h"
#include <algorithm>
#include <array>
#include <bit>
#include <cstddef>
#include <cstdint>
#include <string>
#include <string_view>
#include <utility>
#include <vector>
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/*--------------------------- NAMESPACE ------------------------------------*/
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namespace ADS {
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/*-------------------------- CLASS HuffmanFMIndex --------------------------*/
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template< class RS = RankSelect >
class HuffmanFMIndex {
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public:
explicit HuffmanFMIndex( std::string_view s , std::size_t mu = 32 );
[[nodiscard]] std::size_t size( void ) const { return( f_n ); }
[[nodiscard]] std::pair< std::size_t , std::size_t > range(
std::string_view P ) const;
[[nodiscard]] std::size_t count( std::string_view P ) const;
[[nodiscard]] std::vector< std::size_t > locate( std::string_view P ) const;
[[nodiscard]] std::string extract( std::size_t i , std::size_t j ) const;
[[nodiscard]] std::size_t sizeInBits( void ) const;
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private:
[[nodiscard]] std::size_t place( std::size_t r ) const;
std::size_t f_n = 0 , f_mu = 1;
int f_w = 1;
HuffmanWaveletTree< RS > f_L;
std::array< std::size_t , 258 > f_C{};
CompactRankSelect f_mark;
BitVector f_place;
BitVector f_row;
}; // end( class HuffmanFMIndex )
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} // end( namespace ADS )
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/*-------------------------- IMPLEMENTATION --------------------------------*/
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#include "ADS/compression/impl/HuffmanFMIndex.tpp"
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#endif /* HuffmanFMIndex.h included */
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/*------------------------ End File HuffmanFMIndex.h -----------------------*/
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